CDS

Accession Number TCMCG051C38550
gbkey CDS
Protein Id XP_024439986.1
Location join(1551768..1551917,1552034..1552303,1552392..1552551,1552695..1552858,1553174..1553417,1554281..1554435,1554536..1554625,1555104..1555172,1555301..1555342)
Gene LOC7497327
GeneID 7497327
Organism Populus trichocarpa

Protein

Length 447aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024584218.1
Definition DNA excision repair protein ckn1 isoform X2 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category KL
Description DNA excision repair protein
KEGG_TC -
KEGG_Module M00386        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
ko04121        [VIEW IN KEGG]
KEGG_ko ko:K10570        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03420        [VIEW IN KEGG]
ko04120        [VIEW IN KEGG]
map03420        [VIEW IN KEGG]
map04120        [VIEW IN KEGG]
GOs GO:0000209        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006282        [VIEW IN EMBL-EBI]
GO:0006283        [VIEW IN EMBL-EBI]
GO:0006289        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006979        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009411        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0016567        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0032446        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044877        [VIEW IN EMBL-EBI]
GO:0045739        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048584        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051052        [VIEW IN EMBL-EBI]
GO:0051054        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0051865        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070647        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0080134        [VIEW IN EMBL-EBI]
GO:0080135        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:2001020        [VIEW IN EMBL-EBI]
GO:2001022        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTGGAGGGAAATCAGAGACAGAGAAGCGGGCAAAACCCGCCCCAATTCATTCAAGAACCGGGTCAGTTCCTCCAGGATCTCTAATCTTCAACTCTCCAATTACAAAGACGTTGTCTCCCCTCACAGAGGTTCCATCAACTCTCTTCAGGTTGATTTGACAGAGGGGAGATACTTATTATCCGGGGCATCAGATGCATCAGCTTCTGTTTTTGATATTCAACATGCCACGGATTTTGAAGGGGGAGGAGAAGGAGCTCTGATTGCCAAGCACAAGTCTTTAATTACTATTGACAAGCAACATCAAAATGGTCATAAATTTGCCATATCTTCTGCTATTTGGTATCCAATTGACACGGGCCTATTTGTTACTGGTTCTTATGATCATTATATTAAAGTTTGGGATACAAATTCCACCCAGATGGTTATCAATTTCAAATTGCCTGGAAAGGTGTATAGAACTGCAATGTCTCCGTTGGCAACTTCTCATATGTTAATAGCCGCTGGAACTGAAGATGTTCAAGTTCGACTCTGTGATATTGCTTCGGGGGCATTTGCGCATACGCTATCTGGTCATCGTGTGGAATGGTCTACTTCAAGTGAATGGGTTCTGGTTACTGGGGGATGTGACGGTGCCATACGGTTTTGGGATATCAGGCGTGCTGGATGTTTTCTTGTTTTGGATCAGTCCCAGTCTCAGCTTGGCAGACGGCCACCTGTGCTTGCACGATCTGCCGTGAGTAAGGTTTCAACTTCAAAGGCACTATCTAAAGGCCAAAATCTCCTTGGAAAACCAAGGATGCCTCAAAAGAAATCTGGTGGTGGGAATGGAATAAAGCATTCACCTCTTGGTCAAGTTCCAGCCAAGGGATATCTAAAGCAACGATTACATCCAGGGATGTTGTCAAGTCAGGATCGTGCCACTGCACATTATGGTGCTGTTACTGGTTTAAAAATAACTGAAGATGGCATGTATCTTCTAAGTGCAGGATCAGATTCAAGAATAAGGTTGTGGGATGTCGAATCAGGCCGCAATACCCTTGTGAACTTTGAAACTGCACGCTTACAAACTAGCAAGCCAATTCAGTTGGCCACAGCTCAGGATTCAAATCTCGTTTTTGTTCCATGCATGACCTCTGTGAAAGCATTTGATGTTTGGTCGGGTAAGACGTATGTGACATTTCGTGGCCATTACGAGCATGTGAACTGTTGCTGGTTTAGTTCTCAAGATCAGGAACTGTACACAGGTGGCAATGATAGACAAATTCTAGTTTGGTCCCCGGCCAGATTGATTCCCAACGAGGATGCAAGTCCAGCTGAGGATCAAGATAACTGGAGCGATTGA
Protein:  
MWREIRDREAGKTRPNSFKNRVSSSRISNLQLSNYKDVVSPHRGSINSLQVDLTEGRYLLSGASDASASVFDIQHATDFEGGGEGALIAKHKSLITIDKQHQNGHKFAISSAIWYPIDTGLFVTGSYDHYIKVWDTNSTQMVINFKLPGKVYRTAMSPLATSHMLIAAGTEDVQVRLCDIASGAFAHTLSGHRVEWSTSSEWVLVTGGCDGAIRFWDIRRAGCFLVLDQSQSQLGRRPPVLARSAVSKVSTSKALSKGQNLLGKPRMPQKKSGGGNGIKHSPLGQVPAKGYLKQRLHPGMLSSQDRATAHYGAVTGLKITEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETARLQTSKPIQLATAQDSNLVFVPCMTSVKAFDVWSGKTYVTFRGHYEHVNCCWFSSQDQELYTGGNDRQILVWSPARLIPNEDASPAEDQDNWSD